STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBD5Uncharacterized protein. (436 aa)    
Predicted Functional Partners:
G3TST2_LOXAF
Uncharacterized protein.
 
      0.900
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.686
ASXL2
ASXL transcriptional regulator 2.
   
 0.608
BAP1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.518
RANBP2
RAN binding protein 2.
    
 0.494
KDM1B
Lysine demethylase 1B.
    
 0.488
HCFC2
Host cell factor C2.
    
 0.477
HCFC1
Host cell factor C1.
    
 0.477
UCHL5
Ubiquitin carboxyl-terminal hydrolase.
    
 0.470
KDM6A
Lysine demethylase 6A.
   
 0.446
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.