Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CYB561D2Cytochrome b561 family member D2. (222 aa)    
Predicted Functional Partners:
ZMYND8
Zinc finger MYND-type containing 8.
   
 
 0.564
CYB561
Cytochrome b561.
      
 0.520
STEAP1
Ferric oxidoreductase domain-containing protein.
      
 0.503
INTS5
Integrator complex subunit 5.
   
  0.448
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 0.439
INTS3
Integrator complex subunit 3.
   
   0.436
INTS1
Integrator complex subunit 1.
   
   0.436
ZNF592
Zinc finger protein 592.
   
 
 0.433
AK9
Uncharacterized protein.
    
  0.425
G3TCK5_LOXAF
Uncharacterized protein.
    
  0.425
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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