STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOC7THO complex 7. (204 aa)    
Predicted Functional Partners:
THOC1
THO complex 1.
    
 0.999
THOC2
THO complex 2.
   
 0.998
THOC3
THO complex 3.
   
 0.998
THOC5
THO complex 5.
   
 0.998
THOC6
THO complex 6.
    
 0.992
ALYREF
Aly/REF export factor.
   
 0.915
SARNP
SAP domain containing ribonucleoprotein.
   
 0.915
DDX39B
DExD-box helicase 39B.
   
 0.913
DDX39A
DExD-box helicase 39A.
   
 0.870
PCF11
PCF11 cleavage and polyadenylation factor subunit.
     
 0.841
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.