STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEFSECEukaryotic elongation factor, selenocysteine-tRNA specific. (578 aa)    
Predicted Functional Partners:
SECISBP2
SECIS binding protein 2.
    
 0.934
EIF2S2
Eukaryotic translation initiation factor 2 subunit beta.
   
 0.834
PSTK
Phosphoseryl-tRNA kinase.
      
 0.825
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.821
G3TRE8_LOXAF
Ubiquitin-like domain-containing protein.
   
 0.821
RPS3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.806
EIF2S1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.800
EIF3G
Eukaryotic translation initiation factor 3 subunit G.
   
 0.775
EIF3B
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 0.767
RPS11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.754
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.