STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICAL3Uncharacterized protein. (816 aa)    
Predicted Functional Partners:
G3U2A8_LOXAF
Uncharacterized protein.
   
 
 0.508
LOC100668473
Uncharacterized protein.
   
 
 0.508
RAB8B
RAB8B, member RAS oncogene family.
   
 
 0.492
RAB8A
RAB8A, member RAS oncogene family.
   
 
 0.492
RAB10
RAB10, member RAS oncogene family.
   
 
 0.478
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
   
 
 0.471
G3TUY3_LOXAF
BMERB domain-containing protein.
 
  
 
 0.419
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.