STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3SPN4_LOXAFAquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. (294 aa)    
Predicted Functional Partners:
MIP
Major intrinsic protein of lens fiber; Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.680
SENP1
SUMO specific peptidase 1.
    
 0.672
SENP2
SUMO specific peptidase 2.
    
 0.672
G3SPK1_LOXAF
Small ubiquitin-related modifier.
    
 0.664
G3U994_LOXAF
Small ubiquitin-related modifier.
    
 0.664
SUMO2
Small ubiquitin-related modifier.
    
 0.664
G3UE49_LOXAF
Small ubiquitin-related modifier.
    
 0.664
AQP8
Aquaporin 8; Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.661
AQP7
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.635
AQP6
Aquaporin 6; Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.622
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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