STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NOL11Nucleolar protein 11. (711 aa)    
Predicted Functional Partners:
UTP4
UTP4 small subunit processome component.
   
 0.992
HEATR1
U3snoRNP10 domain-containing protein.
   
 0.968
WDR43
WD repeat domain 43.
   
 0.967
UTP15
UTP15 small subunit processome component.
   
 0.951
UTP20
UTP20 small subunit processome component.
   
 
 0.949
WDR75
WD repeat domain 75.
   
 0.928
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
   
 
 0.912
PDCD11
Programmed cell death 11.
   
 
 0.904
DDX47
DEAD-box helicase 47; Belongs to the DEAD box helicase family.
   
  0.899
UTP3
UTP3 small subunit processome component.
   
 0.894
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.