STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STX7Syntaxin 7; Belongs to the syntaxin family. (263 aa)    
Predicted Functional Partners:
YKT6
YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.
   
 0.998
STX8
Syntaxin 8.
    
 0.983
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.983
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.977
VAMP8
Vesicle associated membrane protein 8.
   
 0.974
VAMP4
Vesicle associated membrane protein 4.
   
 0.891
VPS16
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
    
 
 0.885
VAMP7
Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.
   
 0.885
GOSR1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 
 0.876
SNAP29
Synaptosome associated protein 29.
   
 0.858
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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