STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXF1Forkhead box F1. (434 aa)    
Predicted Functional Partners:
HOXB6
Homeobox B6.
   
 0.581
CLEC14A
C-type lectin domain containing 14A.
    
 0.579
TMEM100
Transmembrane protein 100.
   
  
 0.565
ADGRG6
Adhesion G protein-coupled receptor G6; Belongs to the G-protein coupled receptor 2 family.
      
 0.559
APLNR
Apelin receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.553
GATA4
GATA binding protein 4.
   
 0.519
GATA6
Uncharacterized protein.
   
 0.513
NKX3-2
NK3 homeobox 2.
   
 0.488
CDH5
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
     
 0.487
KPNB1
Karyopherin subunit beta 1.
    
  0.468
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.