STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GGA2Golgi associated, gamma adaptin ear containing, ARF binding protein 2. (605 aa)    
Predicted Functional Partners:
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
   
  0.974
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
   
  0.974
IGF2R
Insulin like growth factor 2 receptor.
    
 
 0.962
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.959
SORT1
Sortilin.
    
 
 0.861
CLINT1
Clathrin interactor 1.
    
 
 0.851
CLTC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.839
EARS2
Glutamyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
   
 0.828
RABGEF1
Uncharacterized protein.
   
 0.824
EPRS1
Glutamyl-prolyl-tRNA synthetase.
     
 0.791
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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