STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGA2Golgi associated, gamma adaptin ear containing, ARF binding protein 2. (605 aa)    
Predicted Functional Partners:
RABGEF1
Uncharacterized protein.
    
 0.964
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
  
 
0.952
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
  
0.948
SORL1
Sortilin related receptor 1.
    
 
 0.886
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.836
IGF2R
Insulin like growth factor 2 receptor.
    
 
 0.823
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.688
SORT1
Sortilin.
    
 
 0.637
BACE1
Beta-secretase 1; Belongs to the peptidase A1 family.
    
 0.588
BACE2
Beta-secretase 2; Belongs to the peptidase A1 family.
    
 0.569
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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