STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXF2Forkhead box F2. (445 aa)    
Predicted Functional Partners:
HOXB6
Homeobox B6.
   
 0.581
ABCF2
Uncharacterized protein.
   
 
 0.562
GATA4
GATA binding protein 4.
   
 0.519
GATA6
Uncharacterized protein.
   
 0.513
NKX3-2
NK3 homeobox 2.
   
 0.488
MRPL4
Mitochondrial ribosomal protein L4.
      
 0.487
KPNB1
Karyopherin subunit beta 1.
    
  0.468
TNPO3
Transportin 3.
     
  0.465
IPO11
Importin 11.
     
  0.465
SUOX
Sulfite oxidase.
     
 0.465
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.