STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SPS5_LOXAFVKc domain-containing protein. (112 aa)    
Predicted Functional Partners:
GGCX
Gamma-glutamyl carboxylase.
   
 
 0.936
NQO1
NAD(P)H quinone dehydrogenase 1.
     
 0.902
VKORC1
Vitamin K epoxide reductase complex subunit 1.
     
  0.870
NQO2
N-ribosyldihydronicotinamide:quinone reductase 2.
     
 0.835
TMX4
Thioredoxin related transmembrane protein 4.
      
 0.562
CCDC86
Coiled-coil domain containing 86.
      
 0.559
TRPT1
tRNA phosphotransferase 1.
   
  
 0.523
GSTZ1
Glutathione S-transferase zeta 1; Belongs to the GST superfamily.
   
  
 0.519
MTMR12
Myotubularin related protein 12.
      
 0.498
EEF2KMT
Uncharacterized protein.
      
 0.498
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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