STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFTPDSurfactant protein D. (375 aa)    
Predicted Functional Partners:
MASP2
Mannan binding lectin serine peptidase 2; Belongs to the peptidase S1 family.
   
 0.928
MASP1
Mannan binding lectin serine peptidase 1; Belongs to the peptidase S1 family.
   
 0.921
SFTPB
Surfactant protein B.
   
 
 0.921
G3SPS6_LOXAF
C-type lectin domain-containing protein.
   
 0.917
C1R
Complement C1r; Belongs to the peptidase S1 family.
   
 0.896
SERPING1
Serpin family G member 1; Belongs to the serpin family.
     
 0.873
MBL2
Mannose binding lectin 2.
   
 
 0.838
C2
Complement C2; Belongs to the peptidase S1 family.
   
 0.823
CFB
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.823
COLEC12
Collectin subfamily member 12.
    
 0.812
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.