STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1DC1D nuclear receptor corepressor. (141 aa)    
Predicted Functional Partners:
EXOSC10
Exosome component 10.
   
 0.999
MPHOSPH6
M-phase phosphoprotein 6.
   
 0.998
EXOSC9
Exosome component 9.
   
 0.995
EXOSC4
Exosome component 4.
   
 0.995
EXOSC2
Exosome component 2.
   
 0.994
EXOSC7
Exosome component 7.
   
 0.994
EXOSC5
Exosome component 5.
   
 0.994
EXOSC1
Exosome component 1.
   
 0.994
EXOSC3
Exosome component 3.
   
 0.993
EXOSC8
Exosome component 8.
   
 0.993
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.