STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRCProtein tyrosine phosphatase receptor type C. (1291 aa)    
Predicted Functional Partners:
SEMA4D
Sema domain-containing protein; Belongs to the semaphorin family.
    
 0.950
LCP2
Lymphocyte cytosolic protein 2.
   
 
 0.858
SPN
Sialophorin.
   
 0.800
CD22
CD22 molecule.
   
 0.784
CD4
CD4 molecule.
   
 0.768
LCK
Tyrosine-protein kinase.
   
 0.760
HCK
Tyrosine-protein kinase.
   
 0.760
DPP4
Dipeptidyl peptidase 4; Belongs to the peptidase S9B family.
   
 
 0.734
PTPRCAP
Protein tyrosine phosphatase receptor type C associated protein.
   
 
 0.726
CD3E
CD3e molecule.
   
 0.724
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.