Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC17A9Uncharacterized protein. (168 aa)    
Predicted Functional Partners:
DECR2
2,4-dienoyl-CoA reductase 2.
   
  
 0.740
CLCN3
Chloride channel protein.
      
 0.737
SVOP
SV2 related protein.
   
  
 0.700
EXOSC10
Exosome component 10.
      
 0.696
FRA10AC1
FRA10A associated CGG repeat 1.
      
 0.674
G3U9Q3_LOXAF
Uncharacterized protein.
      
 0.665
G3UH79_LOXAF
Uncharacterized protein.
      
 0.656
NMNAT3
Nicotinamide-nucleotide adenylyltransferase.
      
 0.633
ACP5
Tartrate-resistant acid phosphatase type 5.
      
 0.572
SNX20
Sorting nexin 20.
      
 0.560
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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