STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEFTY2Left-right determination factor. (367 aa)    
Predicted Functional Partners:
NODAL
Nodal growth differentiation factor.
  
 
 0.951
TGFB3
Transforming growth factor beta; Belongs to the TGF-beta family.
     
 0.920
TGFB2
Transforming growth factor beta; Belongs to the TGF-beta family.
     
 0.919
TGFB1
Transforming growth factor beta; Belongs to the TGF-beta family.
     
 0.919
LOC100662668
Left-right determination factor.
  
  
 
0.900
INHBE
Inhibin subunit beta E.
      
 0.624
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
      
 0.573
TAGLN
Transgelin; Belongs to the calponin family.
   
 
 0.523
ACVR1B
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.486
G3SXC4_LOXAF
EGF-like domain-containing protein.
    
 0.446
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.