STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPUSD1RNA pseudouridine synthase domain containing 1. (302 aa)    
Predicted Functional Partners:
PUS7L
Pseudouridine synthase 7 like.
    
 
 0.736
GTPBP3
GTP binding protein 3, mitochondrial.
  
 
 0.721
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
  
 
 0.717
NDUFAB1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.657
PUS10
Pseudouridine synthase 10.
      
 0.656
PUSL1
tRNA pseudouridine synthase.
  
  
 0.655
PUS7
Pseudouridine synthase 7.
    
 
 0.650
MRM3
Mitochondrial rRNA methyltransferase 3.
  
 
 0.640
GTPBP8
GTP binding protein 8 (putative).
   
 
 0.632
RPL23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.627
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (30%) [HD]