STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C12orf65Chromosome 12 open reading frame 65. (166 aa)    
Predicted Functional Partners:
MRPL58
Mitochondrial ribosomal protein L58.
   
 
 0.870
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
  
 
 0.761
HEMK1
HemK methyltransferase family member 1.
  
 
 0.761
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.744
YARS1
Tyrosine--tRNA ligase.
  
  
 0.742
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.681
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.670
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.667
MRPS6
Mitochondrial ribosomal protein S6.
  
 
 0.660
MRPS16
Mitochondrial ribosomal protein S16.
  
 
 0.659
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.