STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTBD6BTB domain containing 6. (414 aa)    
Predicted Functional Partners:
NUDT22
Nudix hydrolase 22.
      
 0.580
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.576
KCTD6
Potassium channel tetramerization domain containing 6.
    
 0.545
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.524
GAN
Gigaxonin.
     
 0.518
COMMD8
COMM domain containing 8.
     
 0.512
RBX1
Ring-box 1.
    
 0.501
CAND1
Cullin associated and neddylation dissociated 1.
     
 0.495
CAND2
Cullin associated and neddylation dissociated 2 (putative).
     
 0.495
KBTBD13
Kelch repeat and BTB domain containing 13.
    
 0.493
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.