Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BTBD6BTB domain containing 6. (414 aa)    
Predicted Functional Partners:
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.760
NUDT22
Nudix hydrolase 22.
      
 0.653
KCTD6
Potassium channel tetramerization domain containing 6.
    
 0.566
TMEM52
Uncharacterized protein.
      
 0.562
COMMD9
COMM domain containing 9.
     
  0.551
COMMD5
COMM domain containing 5.
     
  0.551
BTBD3
BTB domain containing 3.
    
  0.548
GOLGB1
Golgin B1.
    
 0.530
CAND1
Cullin associated and neddylation dissociated 1.
     
 0.530
CAND2
Cullin associated and neddylation dissociated 2 (putative).
     
 0.530
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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