STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRUB2TruB pseudouridine synthase family member 2. (303 aa)    
Predicted Functional Partners:
NOP58
NOP58 ribonucleoprotein.
  
 
 0.925
NOP10
NOP10 ribonucleoprotein.
   
 0.903
SHQ1
CS domain-containing protein.
   
 0.889
NOP56
NOP56 ribonucleoprotein.
   
 
 0.854
G3UFS0_LOXAF
Uncharacterized protein.
   
 
 0.854
FBLL1
Fibrillarin like 1.
   
 
 0.808
FBL
Fibrillarin.
   
 
 0.808
WRAP53
WD repeat containing antisense to TP53.
    
 0.803
EIF5B
Eukaryotic translation initiation factor 5B.
  
 
 0.789
MTIF2
Mitochondrial translational initiation factor 2.
  
 
 0.789
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.