SLC27A4 protein (Loxodonta africana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

SLC27A4

Solute carrier family 27 member 4. (644 aa)

Predicted Functional Partners:

PTPN6

0.829

SCP2

0.803

SLC27A5

0.773

SLC27A6

0.762

SLC27A2

0.736

HSDL2

0.678

BBS9

0.665

BBS7

0.663

BBS1

0.662

ERI1

0.655

Your Current Organism:

Loxodonta africana

NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS1	BBS7	ENSLAFP00000017420	ENSLAFP00000007985	BBS1 domain-containing protein.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.998
BBS1	BBS9	ENSLAFP00000017420	ENSLAFP00000005399	BBS1 domain-containing protein.	Bardet-Biedl syndrome 9.	0.998
BBS1	SLC27A2	ENSLAFP00000017420	ENSLAFP00000003963	BBS1 domain-containing protein.	Solute carrier family 27 member 2.	0.662
BBS1	SLC27A4	ENSLAFP00000017420	ENSLAFP00000001821	BBS1 domain-containing protein.	Solute carrier family 27 member 4.	0.662
BBS1	SLC27A5	ENSLAFP00000017420	ENSLAFP00000002286	BBS1 domain-containing protein.	Solute carrier family 27 member 5.	0.662
BBS1	SLC27A6	ENSLAFP00000017420	ENSLAFP00000001806	BBS1 domain-containing protein.	Solute carrier family 27 member 6.	0.662
BBS7	BBS1	ENSLAFP00000007985	ENSLAFP00000017420	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	BBS1 domain-containing protein.	0.998
BBS7	BBS9	ENSLAFP00000007985	ENSLAFP00000005399	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Bardet-Biedl syndrome 9.	0.999
BBS7	SLC27A2	ENSLAFP00000007985	ENSLAFP00000003963	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Solute carrier family 27 member 2.	0.663
BBS7	SLC27A4	ENSLAFP00000007985	ENSLAFP00000001821	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Solute carrier family 27 member 4.	0.663
BBS7	SLC27A5	ENSLAFP00000007985	ENSLAFP00000002286	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Solute carrier family 27 member 5.	0.663
BBS7	SLC27A6	ENSLAFP00000007985	ENSLAFP00000001806	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Solute carrier family 27 member 6.	0.663
BBS9	BBS1	ENSLAFP00000005399	ENSLAFP00000017420	Bardet-Biedl syndrome 9.	BBS1 domain-containing protein.	0.998
BBS9	BBS7	ENSLAFP00000005399	ENSLAFP00000007985	Bardet-Biedl syndrome 9.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.999
BBS9	SLC27A2	ENSLAFP00000005399	ENSLAFP00000003963	Bardet-Biedl syndrome 9.	Solute carrier family 27 member 2.	0.665
BBS9	SLC27A4	ENSLAFP00000005399	ENSLAFP00000001821	Bardet-Biedl syndrome 9.	Solute carrier family 27 member 4.	0.665
BBS9	SLC27A5	ENSLAFP00000005399	ENSLAFP00000002286	Bardet-Biedl syndrome 9.	Solute carrier family 27 member 5.	0.665
BBS9	SLC27A6	ENSLAFP00000005399	ENSLAFP00000001806	Bardet-Biedl syndrome 9.	Solute carrier family 27 member 6.	0.665
ERI1	PTPN6	ENSLAFP00000004157	ENSLAFP00000019274	Exoribonuclease 1.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.737
ERI1	SLC27A4	ENSLAFP00000004157	ENSLAFP00000001821	Exoribonuclease 1.	Solute carrier family 27 member 4.	0.655

page 1 of 4

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About