STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OMDOsteomodulin. (342 aa)    
Predicted Functional Partners:
OGN
Osteoglycin.
   
 
 0.753
ACAN
Aggrecan.
    
 0.585
FMOD
Fibromodulin.
   
 
 0.576
LUM
Lumican.
   
 
 0.570
PRELP
Proline and arginine rich end leucine rich repeat protein.
   
 
 0.559
KERA
Keratocan.
   
 
 0.548
TNFRSF19
TNF receptor superfamily member 19.
      
 0.539
LRRC10
Leucine rich repeat containing 10.
  
     0.527
LRR1
Leucine rich repeat protein 1.
  
   
0.525
AHSG
Alpha 2-HS glycoprotein.
    
 0.521
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.