STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASH1LASH1 like histone lysine methyltransferase. (1974 aa)    
Predicted Functional Partners:
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.962
KMT2E
Lysine methyltransferase 2E.
   
 0.929
PRDM2
PR/SET domain 2.
  
 0.927
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.886
NSD3
Nuclear receptor binding SET domain protein 3.
   
 
 0.886
SMYD2
SET and MYND domain containing 2.
     
 0.885
KMT5B
Lysine methyltransferase 5B.
   
 
 0.883
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
 0.876
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
    
 0.876
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
 0.876
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.