STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GKN1Gastrokine 1. (190 aa)    
Predicted Functional Partners:
GKN2
Gastrokine 2.
  
  
0.969
GABRD
Gamma-aminobutyric acid type A receptor delta subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
    0.953
ITM2B
Integral membrane protein 2B.
      
 0.700
TNMD
Tenomodulin.
      
 0.700
ITM2C
Integral membrane protein 2C.
      
 0.700
C16orf91
Chromosome 16 open reading frame 91.
      
 0.687
TCF23
Transcription factor 23.
      
 0.494
CAPN9
Calpain 9; Belongs to the peptidase C2 family.
      
 0.461
CAPN3
Calpain 3; Belongs to the peptidase C2 family.
      
 0.461
TFF2
Trefoil factor 2.
   
  
 0.428
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.