STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REM2GTP-binding protein; Belongs to the small GTPase superfamily. RGK family. (272 aa)    
Predicted Functional Partners:
CA10
Carbonic anhydrase 10; Belongs to the alpha-carbonic anhydrase family.
   
  
 0.829
KIF9
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.605
CA11
Carbonic anhydrase 11; Belongs to the alpha-carbonic anhydrase family.
   
  
 0.586
NOS1AP
Nitric oxide synthase 1 adaptor protein.
    
 0.575
ITSN2
Intersectin 2.
   
 0.532
G3U095_LOXAF
Uncharacterized protein.
   
 0.532
DOCK4
Dedicator of cytokinesis 4; Belongs to the DOCK family.
   
 0.503
RHO
Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by the arrestin SAG and terminates signaling (By similarity).
    
 0.499
REM1
GTP-binding protein; Belongs to the small GTPase superfamily. RGK family.
      
 0.490
TSC2
TSC complex subunit 2.
    
 0.456
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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