Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSMB3Proteasome subunit beta. (205 aa)    
Predicted Functional Partners:
PSMB4
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.996
PSMB2
Proteasome subunit beta.
   
 0.993
PSMA2
Proteasome subunit alpha type.
   
 0.987
PSMA5
Proteasome subunit alpha type.
   
 0.987
PSMB1
Proteasome subunit beta.
   
0.987
PSMB6
Proteasome subunit beta.
   
0.986
PSMA3
Proteasome subunit alpha type.
   
 0.985
PSMA4
Proteasome subunit alpha type.
   
 0.985
PSMA1
Proteasome subunit alpha type.
   
 0.982
PSMA6
Proteasome subunit alpha type.
   
 0.982
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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