STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGFG1ArfGAP with FG repeats 1. (510 aa)    
Predicted Functional Partners:
VAMP7
Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.
    
 0.925
EPS15
Epidermal growth factor receptor pathway substrate 15.
    
 0.888
EPS15L1
Epidermal growth factor receptor pathway substrate 15 like 1.
    
 0.819
TMPRSS12
Transmembrane serine protease 12; Belongs to the peptidase S1 family.
      
 0.737
FAM126B
Family with sequence similarity 126 member B.
      
 0.653
ITSN2
Intersectin 2.
    
 0.634
G3U095_LOXAF
Uncharacterized protein.
    
 0.634
MEAK7
MTOR associated protein, eak-7 homolog.
      
 0.617
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
      
 0.584
CCDC62
Uncharacterized protein.
      
 0.573
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.