STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXR1Fork-head domain-containing protein. (314 aa)    
Predicted Functional Partners:
KAT5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.701
EP400
E1A binding protein p400.
    
  0.695
MYC
Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes.
   
 0.691
ING3
Inhibitor of growth protein.
   
   0.688
MBTD1
Mbt domain containing 1.
    
  0.686
DMAP1
DNA methyltransferase 1 associated protein 1.
    
   0.685
YEATS4
YEATS domain containing 4.
    
   0.685
EPC1
Enhancer of polycomb homolog.
    
   0.685
VPS72
Vacuolar protein sorting 72 homolog.
   
   0.685
EPC2
Enhancer of polycomb homolog.
    
   0.685
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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