STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SQ64_LOXAFUncharacterized protein. (193 aa)    
Predicted Functional Partners:
CASP7
Caspase 7; Belongs to the peptidase C14A family.
 
 
 0.938
G3ULI4_LOXAF
Uncharacterized protein; Belongs to the peptidase C14A family.
 
     0.922
CASP3
Caspase 3; Belongs to the peptidase C14A family.
 
 
 0.916
CFLAR
CASP8 and FADD like apoptosis regulator; Belongs to the peptidase C14A family.
   
 0.909
TRADD
TNFRSF1A associated via death domain.
   
 0.905
RIPK1
Receptor interacting serine/threonine kinase 1.
   
 0.905
RIPK3
Uncharacterized protein.
   
 0.893
FASLG
Tumor necrosis factor ligand 1A; Belongs to the tumor necrosis factor family.
    
 0.878
G3TWQ7_LOXAF
Uncharacterized protein.
   
 0.869
CASP6
Caspase 6; Belongs to the peptidase C14A family.
   
 0.866
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.