STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM136AFamily with sequence similarity 136 member A. (138 aa)    
Predicted Functional Partners:
ASPSCR1
TUG-UBL1 domain-containing protein.
    
   0.774
GGCX
Gamma-glutamyl carboxylase.
      
 0.742
FAM8A1
Family with sequence similarity 8 member A1.
      
 0.737
DIPK1A
Divergent protein kinase domain 1A.
      
 0.672
SLC35E4
Solute carrier family 35 member E4.
      
 0.667
SLC6A7
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.663
SNX24
Sorting nexin 24.
      
 0.622
STRC
Stereocilin.
      
 0.571
PCYOX1L
Prenylcysteine oxidase 1 like.
      
 0.568
PCYOX1
Prenylcysteine oxidase 1.
      
 0.568
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.