STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAS1Breast carcinoma amplified sequence 1. (513 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
   
 0.795
QKI
QKI, KH domain containing RNA binding.
   
 
 0.587
ZNF217
Zinc finger protein 217.
    
 0.495
CENPT
Centromere protein T.
    
 0.480
MEIOB
Meiosis specific with OB-fold.
   
 0.439
ENPP6
Ectonucleotide pyrophosphatase/phosphodiesterase 6.
   
 
 0.422
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.419
GPR17
G protein-coupled receptor 17; Belongs to the G-protein coupled receptor 1 family.
     
 0.419
PLP1
Proteolipid protein 1.
   
  
 0.407
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.