STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALOXE3Arachidonate lipoxygenase 3. (711 aa)    
Predicted Functional Partners:
GPX7
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.799
LTC4S
Leukotriene C4 synthase.
   
 0.750
LTA4H
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
     
 0.746
PLA2G12B
Phospholipase A2 group XIIB.
    
 0.722
PTGS1
Prostaglandin-endoperoxide synthase 1.
    
 0.714
PTGS2
Prostaglandin-endoperoxide synthase 2.
    
 0.714
PLA2G4A
Phospholipase A2.
     
 0.707
PLA2G6
Phospholipase A2 group VI.
   
 
 0.707
PLA2G2F
Phospholipase A(2).
   
 
 0.698
CYP2U1
Cytochrome P450 family 2 subfamily U member 1; Belongs to the cytochrome P450 family.
    
 0.691
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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