STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL10Oxysterol-binding protein; Belongs to the OSBP family. (585 aa)    
Predicted Functional Partners:
OSBPL9
Oxysterol-binding protein; Belongs to the OSBP family.
    
  
0.636
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.511
LPIN1
Lipin 1.
    
 0.497
NFE2L1
Nuclear factor, erythroid 2 like 1.
      
 0.475
PNPLA2
Patatin like phospholipase domain containing 2.
   
  
 0.464
RHOH
Ras homolog family member H.
    
  0.433
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.413
RAB7A
RAB7A, member RAS oncogene family.
    
 0.405
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.