STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXC9Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (260 aa)    
Predicted Functional Partners:
HOXC6
Homeobox C6.
   
 
 0.963
HOXC10
Homeobox C10.
   
 
 0.877
HOXD9
Homeobox D9.
   
 
 0.807
HOXB6
Homeobox B6.
   
 
 0.677
PBX1
PBX homeobox 1.
    
 
 0.671
PBX3
PBX homeobox 3.
    
 
 0.671
PBX2
PBX homeobox 2.
    
 
 0.671
TMEM26
Transmembrane protein 26.
      
 0.668
HOXC4
Homeobox C4.
   
 
 0.632
MEIS2
Meis homeobox 2.
    
 
 0.614
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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