STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC5Homeobox C5. (230 aa)    
Predicted Functional Partners:
HOXC4
Homeobox C4.
 
 
 
 0.846
HOXC6
Homeobox C6.
   
 
0.842
FGF5
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
 
 0.593
HOXB6
Homeobox B6.
   
 
0.569
HOXB5
Homeobox B5.
  
  
0.548
HOXA7
Homeobox A7.
   
  
0.541
HOXD4
Homeobox D4.
   
  
0.541
HOXB7
Homeobox B7.
   
  
0.533
HOXB4
Homeobox B4.
   
  
0.530
HOXA6
Homeobox A6.
   
  
0.528
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.