STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC39Leucine rich repeat containing 39. (314 aa)    
Predicted Functional Partners:
ZNF574
Zinc finger protein 574.
    
 0.687
TOGARAM2
TOG array regulator of axonemal microtubules 2.
      
 0.681
FITM1
Fat storage inducing transmembrane protein 1.
   
  
 0.666
KRCC1
Lysine rich coiled-coil 1.
      
 0.644
SMTNL1
Smoothelin like 1.
   
  
 0.593
UBTD2
Ubiquitin domain containing 2.
      
 0.577
LYSMD2
LysM domain containing 2.
   
  
 0.560
LURAP1L
Leucine rich adaptor protein 1 like.
      
 0.557
G3SKX8_LOXAF
C2H2-type domain-containing protein.
      
 0.554
RASSF2
Ras association domain family member 2.
      
 0.546
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.