STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EYA1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (591 aa)    
Predicted Functional Partners:
SIX1
SIX homeobox 1.
   
 0.943
SIX5
SIX homeobox 5.
   
 0.872
G3UMV3_LOXAF
Homeobox domain-containing protein.
   
 0.872
PAX8
Paired domain-containing protein.
    
 0.791
DACH1
Dachshund family transcription factor 1.
    
 
 0.772
SIX4
SIX homeobox 4.
   
 0.713
PAX2
Paired box 2.
    
 0.704
PAX5
Paired box 5.
    
 0.704
SALL1
Spalt like transcription factor 1.
     
 0.701
CERT1
Ceramide transporter 1.
    
 
 0.622
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.