STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIRREL1Kirre like nephrin family adhesion molecule 1. (745 aa)    
Predicted Functional Partners:
NPHS1
NPHS1 adhesion molecule, nephrin.
   
0.961
TJP1
Tight junction protein 1; Belongs to the MAGUK family.
    
 0.813
CD2AP
CD2 associated protein.
    
 0.765
NPHS2
NPHS2 stomatin family member, podocin.
    
 0.744
CD5L
CD5 molecule like.
   
  
 0.644
CAPN8
Calpain 8; Belongs to the peptidase C2 family.
     
 0.633
FAT1
FAT atypical cadherin 1.
   
 
 0.570
REL
REL proto-oncogene, NF-kB subunit.
    
 0.553
NCK1
Cytoplasmic protein.
    
 0.551
FCRL3
Fc receptor like 3.
      
 0.530
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.