STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC18A1Solute carrier family 18 member A1. (525 aa)    
Predicted Functional Partners:
SLC32A1
Solute carrier family 32 member 1.
     
 0.931
SLC17A6
Solute carrier family 17 member 6.
     
 0.914
SNCA
Alpha-synuclein; Belongs to the synuclein family.
     
 0.897
SLC17A8
Solute carrier family 17 member 8.
     
 0.886
SLC17A7
Solute carrier family 17 member 7.
     
 0.886
SLC18A3
Solute carrier family 18 member A3.
     
  0.870
SLC18A2
Solute carrier family 18 member A2.
     
  0.870
CHAT
Choline O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
 
 
 
 0.700
EMC8
ER membrane protein complex subunit 8.
    
   0.683
CRAT
Carnitine O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
 
 
 
 0.662
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.