STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTBD1BTB domain containing 1. (480 aa)    
Predicted Functional Partners:
CUL3
Cullin 3; Belongs to the cullin family.
   
 0.660
COPS3
COP9 signalosome subunit 3.
    
 0.591
COPS2
COP9 signalosome subunit 2.
   
  0.576
AP3B2
AP-3 complex subunit beta.
      
 0.563
DSCC1
DNA replication and sister chromatid cohesion 1.
      
 0.561
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.544
CUL1
Cullin 1; Belongs to the cullin family.
   
 0.530
MKX
Mohawk homeobox.
      
 0.521
IRF6
Interferon regulatory factor 6.
      
 0.520
RBX1
Ring-box 1.
   
 0.515
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.