STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXNL1Nucleoredoxin like 1. (189 aa)    
Predicted Functional Partners:
C8orf37
Chromosome 8 open reading frame 37.
      
 0.692
SLC18A2
Solute carrier family 18 member A2.
      
 0.658
KCNV2
Potassium voltage-gated channel modifier subfamily V member 2; Belongs to the potassium channel family.
   
  
 0.609
TNNI1
Troponin I1, slow skeletal type.
      
 0.598
TNNI3
Troponin I3, cardiac type.
      
 0.588
PDE6H
Phosphodiesterase 6H.
   
  
 0.536
ABCA4
ATP binding cassette subfamily A member 4.
   
  
 0.532
PDE6C
Phosphodiesterase.
   
  
 0.497
VSX1
Visual system homeobox 1.
   
  
 0.488
STARD8
StAR related lipid transfer domain containing 8.
   
  
 0.449
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.