STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDGFL3HDGF like 3. (175 aa)    
Predicted Functional Partners:
MIGA1
Mitoguardin 1.
      
 0.763
SRRD
SRR1 domain containing.
      
 0.661
SNN
Stannin.
      
 0.588
CLCN1
Chloride voltage-gated channel 1.
      
 0.564
NECTIN3
Nectin cell adhesion molecule 3.
      
 0.545
SPINDOC
Spindlin interactor and repressor of chromatin binding.
      
 0.545
PTPRD
Protein tyrosine phosphatase receptor type D.
      
 0.543
ANTXR2
Anthrax toxin receptor; Belongs to the ATR family.
    
 0.532
TMTC2
Transmembrane O-mannosyltransferase targeting cadherins 2.
    
 
 0.477
SRBD1
S1 motif domain-containing protein.
   
  
 0.427
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.