Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHST11Carbohydrate sulfotransferase. (352 aa)    
Predicted Functional Partners:
CHST12
Carbohydrate sulfotransferase.
     
 0.872
CHST13
Carbohydrate sulfotransferase.
     
  0.870
CHSY1
Hexosyltransferase.
     
 0.760
CSGALNACT1
Hexosyltransferase.
     
 0.719
DSE
Dermatan sulfate epimerase.
      
 0.675
CSGALNACT2
Hexosyltransferase.
     
 0.675
CHST15
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.661
COP1
COP1 E3 ubiquitin ligase.
      
 0.659
NDST2
Uncharacterized protein.
      
 0.644
UST
Uronyl 2-sulfotransferase.
      
 0.615
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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