STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BBOF1Basal body orientation factor 1. (531 aa)    
Predicted Functional Partners:
CFAP206
Uncharacterized protein.
    
 
 0.836
GK
Uncharacterized protein; Belongs to the FGGY kinase family.
   
 
 0.812
GK2
Glycerol kinase 2; Belongs to the FGGY kinase family.
   
 
 0.812
CCDC9
Coiled-coil domain containing 9.
    
 0.749
CCDC78
Coiled-coil domain containing 78.
   
 
 0.670
INTS8
Integrator complex subunit 8.
    
 0.654
CCDC113
Coiled-coil domain containing 113.
   
 
 0.642
IQSEC2
IQ motif and Sec7 domain 2.
      
 0.569
SACS
Sacsin molecular chaperone.
    
 0.550
G3THL9_LOXAF
Helicase C-terminal domain-containing protein.
    
 
 0.504
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.