Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LIN52Lin-52 DREAM MuvB core complex component. (116 aa)    
Predicted Functional Partners:
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.999
LIN37
Lin-37 DREAM MuvB core complex component.
    
 0.998
LIN54
Lin-54 DREAM MuvB core complex component.
    
 0.997
MYBL2
MYB proto-oncogene like 2.
    
 0.994
MYBL1
MYB proto-oncogene like 1.
    
 0.979
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.973
TESMIN
Testis expressed metallothionein like protein.
    
 0.953
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.946
FOXM1
Forkhead box M1.
     
 0.931
DYRK1A
Dual specificity tyrosine phosphorylation regulated kinase 1A.
    
 0.929
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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