STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBBP4RB binding protein 4, chromatin remodeling factor. (425 aa)    
Predicted Functional Partners:
LIN54
Lin-54 DREAM MuvB core complex component.
   
 0.981
LIN37
Lin-37 DREAM MuvB core complex component.
    
 0.981
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.975
LIN52
Lin-52 DREAM MuvB core complex component.
   
 0.973
EED
Embryonic ectoderm development.
   
 0.970
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.967
HAT1
Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG.
   
 0.956
MYBL2
MYB proto-oncogene like 2.
   
 0.953
AEBP2
AE binding protein 2.
    
 0.943
MTA2
Metastasis associated 1 family member 2.
   
 0.939
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.