STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBBP4RB binding protein 4, chromatin remodeling factor. (425 aa)    
Predicted Functional Partners:
LIN37
Lin-37 DREAM MuvB core complex component.
    
 0.996
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.995
LIN52
Lin-52 DREAM MuvB core complex component.
   
 0.993
LIN54
Lin-54 DREAM MuvB core complex component.
   
 0.992
ARID4A
AT-rich interaction domain 4A.
   
 0.988
ARID4B
AT-rich interaction domain 4B.
   
 0.988
NYNRIN
NYN domain and retroviral integrase containing.
   
 0.982
EED
Embryonic ectoderm development.
   
 0.968
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.968
MYBL2
MYB proto-oncogene like 2.
   
 0.961
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.