STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTERF3Mitochondrial transcription termination factor 3. (413 aa)    
Predicted Functional Partners:
FASTKD2
FAST kinase domains 2.
   
 0.948
TRUB2
TruB pseudouridine synthase family member 2.
   
 0.885
PTCD1
Uncharacterized protein.
   
 
 0.870
DDX28
DEAD-box helicase 28.
    
 
 0.854
RCC1L
RCC1 like.
    
  0.837
RPUSD4
RNA pseudouridine synthase D4.
   
 0.797
UQCRC2
Ubiquinol-cytochrome c reductase core protein 2; Belongs to the peptidase M16 family.
     
 0.792
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
 
      0.784
LOC100676911
Cytochrome b-c1 complex subunit 6; This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This protein may mediate formation of the complex between cytochromes c and c1. Belongs to the UQCRH/QCR6 family.
     
  0.761
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
     
  0.761
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.