STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZMYND8Zinc finger MYND-type containing 8. (1220 aa)    
Predicted Functional Partners:
ZNF687
Zinc finger protein 687.
   
 
 0.972
CHD4
Uncharacterized protein.
    
 
 0.932
INTS3
Integrator complex subunit 3.
   
   0.930
INTS5
Integrator complex subunit 5.
    
   0.927
INTS1
Integrator complex subunit 1.
    
   0.927
INTS6
Integrator complex subunit 6.
    
   0.927
ZNF592
Zinc finger protein 592.
   
 
 0.910
GATAD2A
GATA zinc finger domain containing 2A.
   
 
 0.884
MTA1
Metastasis associated 1.
    
 
 0.829
TSPYL2
TSPY like 2; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.821
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.