STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYNRGSynergin gamma. (1340 aa)    
Predicted Functional Partners:
AFTPH
Aftiphilin.
   
 0.949
ITSN2
Intersectin 2.
   
 0.927
G3U095_LOXAF
Uncharacterized protein.
   
 0.927
AP1S2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.910
AP1G2
AP-1 complex subunit gamma.
   
 0.856
AP1G1
AP-1 complex subunit gamma.
   
 0.856
ITSN1
Intersectin 1.
   
 0.827
AP1S3
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.825
CLTA
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
   
 0.791
CLTB
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
   
 0.791
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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